SNAKEMAKE
Linters
| Linter | Configuration key |
|---|---|
| snakemake | SNAKEMAKE_LINT |
| snakefmt | SNAKEMAKE_SNAKEFMT |
Linted files
- File extensions:
.smk
- File names:
Snakefile
Configuration in Mega-Linter
| Variable | Description | Default value |
|---|---|---|
| SNAKEMAKE_FILTER_REGEX_INCLUDE | Custom regex including filter | |
| SNAKEMAKE_FILTER_REGEX_EXCLUDE | Custom regex excluding filter |